FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007905983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007905983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70375734
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTGAGGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACA8584201.2197670293570224No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4722370.6710224862450457No Hit
GGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGGGGTT4224480.6002750891379691No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4006820.5693468149120832No Hit
GTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGGGGTTA3455450.49100020754312845No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3361760.47768738014156986No Hit
GGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGGGGTTAGGCCTCT3126550.4442653486214439No Hit
AAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGGGGTTAGG2515030.3573717611243671No Hit
GGGGTGAGGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGAC1497510.21278783394287581No Hit
GGTGAGGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAG1357040.1928278289786647No Hit
AAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGGGGTTAGGC1249630.17756546596018452No Hit
CCCTGTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCAT1196030.16994920436638003No Hit
GGTTAGGCCTCTTTTTACCAGCTCCGAGGTGATTTTCATATTGAATTGCA1156730.16436489316047487No Hit
GCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGGGGTTAGGCCTCTT1033300.14682617732981657No Hit
GGAGGCCATGGGGTTGGCTTGAAACCAGCTTTGGGGGGTTCGATTCCTTC990550.1407516403310266No Hit
CTGTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCATTT977790.13893851536951643No Hit
GTGAGGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAGACAGG906820.1288540734793615No Hit
GTTGGCTTGAAACCAGCTTTGGGGGGTTCGATTCCTTCCTTTTTTGTCTA810150.1151178046682966No Hit
TGGGGGTGAGGTAAAATGGCTGAGTGAAGCATTGGACTGTAAATCTAAAG773390.10989441332150084No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)