FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007906017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007906017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71658115
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3745710.5227195831204882No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2534110.3536389423584475No Hit
GTGAAAGATGAGCTGGAGGACCGCAATAGGGGTAGGTCCCCTGTGGAAAA1633450.2279504561346611No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1046670.14606440596434891No Hit
CAAAATTCTGTGACAAATTTTTGGTCAAGTTGTTTCCATTAAAAAGTACT898110.12533262980752424No Hit
GTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAG853650.11912816852634206No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)