FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007906055

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007906055
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61494605
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7897651.2842833936407918No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2874410.4674247440080313No Hit
GTCAAAAGAAAGCTCTTTATTGATTGACTCAGCAATGCAGGGCTGGCACC1824680.29672196447151744No Hit
CCCTGTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCAT1804910.29350704830122903No Hit
GTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCATTTAC1510670.24565894845572223No Hit
CTGTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCATTT1261630.20516108689534635No Hit
GCTTTATTGGCTTATAGACCTGGGCAGTCCAGGTGTAGATCTGGTTCCAG1151980.18733025441825343No Hit
CGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1023250.16639671073584422No Hit
CTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCATTTACGGG970190.15776831154537865No Hit
CCACCTCTTAAGCATTTATTAGATGCCTATTATATGCCATATCTCAGCTT934970.15204097985506207No Hit
CACCTCTTAAGCATTTATTAGATGCCTATTATATGCCATATCTCAGCTTC891000.14489075911618587No Hit
AAAGAAAGCTCTTTATTGATTGACTCAGCAATGCAGGGCTGGCACCCATC706200.1148393424106066No Hit
TGTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCATTTA690760.11232855304949109No Hit
CTTTAATCGTTGAACAAACGAACCTTTAATAGCGGCTGCACCATTGGGAT669660.1088973577438216No Hit
GCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT616920.10032099563856049No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)