FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007906149

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007906149
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63700772
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT6086470.9554782161823723No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3186930.5002969194784641No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1857390.2915804536874373No Hit
CGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT837690.1315039007690519No Hit
GCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT771350.12108958428321717No Hit
CAAAATTCTGTGACAAATTTTTGGTCAAGTTGTTTCCATTAAAAAGTACT729950.11459044797761636No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)