FastQCFastQC Report
Wed 1 May 2024
EGAF00007911673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007911673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24204538
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGAAGAATGGCCAGTGCAACATTGAGTTCGCCAACATGGACGAGAAGTC306950.12681506253083616No Hit
AGAATCATCTTCAGACAGCCCACTCGCAATATCAGGAGGAGAATCTTCCT306560.12665393572064873No Hit
GAATTACACGCCCTCCATGCATCAAGAAGCACAGGTAAATCTAAGCTGTG267330.1104462311984637No Hit
TCAAAATGCCTTTCCACCGCTATTCTTCCCCCATAAGTGACTGTGACGTT266250.1100000338779447No Hit
AATGACTGTCTCTATTTTCCCGTGTCTTTCAGTAATGTATCCTGCATATG262960.10864078463303037No Hit
CTGTGACTTCTCGTCCATGTTGGCGAACTCAATGTTGCACTGGCCATTCT258990.10700059633445597No Hit
GGTTGTTCTTGAGTCTCCTGCACCCTGGGGTCTCCCAGAGAATCTTGGAA247330.1021833178555195No Hit
AAGGATACTTAATTGTGTGGCATGTTGTTGATAGAGAATGCAGTCATGTA244620.10106369309755056No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)