FastQCFastQC Report
Mon 22 May 2023
EGAF00007911673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007911673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24204538
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAATCATCTTCAGACAGCCCACTCGCAATATCAGGAGGAGAATCTTCCT302440.12495177557200225No Hit
AAGAAGAATGGCCAGTGCAACATTGAGTTCGCCAACATGGACGAGAAGTC301540.12457994447156975No Hit
TCAAAATGCCTTTCCACCGCTATTCTTCCCCCATAAGTGACTGTGACGTT262710.10853749821624359No Hit
AATGACTGTCTCTATTTTCCCGTGTCTTTCAGTAATGTATCCTGCATATG260730.1077194697952921No Hit
GAATTACACGCCCTCCATGCATCAAGAAGCACAGGTAAATCTAAGCTGTG260360.10756660589844765No Hit
CTGTGACTTCTCGTCCATGTTGGCGAACTCAATGTTGCACTGGCCATTCT256090.10580247389972905No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)