FastQCFastQC Report
Tue 23 May 2023
EGAF00007912932

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007912932
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88766979
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGGCCTTCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT3677830.414324114826528No Hit
AGCTGGCCTTCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA1225850.13809752385512636No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)