FastQCFastQC Report
Tue 23 May 2023
EGAF00007912973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007912973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences120238888
Sequences flagged as poor quality0
Sequence length101
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT4129840.34346957699741865No Hit
GGGCAGGGCGCCCTGGAATGGGTTCGCCCCGAGAGAGGGGCCCGTGCCTT1979910.16466469649985452No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1439930.11975576487367381No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)