FastQCFastQC Report
Mon 22 May 2023
EGAF00007912988

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007912988
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences242450981
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCACGCAAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT12320610.5081691131618891No Hit
CTCCACGCAAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA7344430.3029243259692152No Hit
CTCCACGCAAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC2804910.11568977730801591No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)