FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007912990

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007912990
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences275681888
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTTTGATTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT8892510.3225641722244735No Hit
GTCTTTGATTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA5253850.1905765387097175No Hit
GTCTTTGATTAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC2894490.10499383985646529No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)