FastQCFastQC Report
Mon 22 May 2023
EGAF00007912992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007912992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences270195391
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTTTGATTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT8428400.31193722323709067No Hit
GTCTTTGATTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA4852400.17958855560197176No Hit
GTCTTTGATTAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC2837020.1049988302724231No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)