FastQCFastQC Report
Wed 31 May 2023
EGAF00007913013

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007913013
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences253577241
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATGATACAAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT10887150.42934255286735296No Hit
AAATGATACAAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC4040140.15932581268206164No Hit
AAATGATACAATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA3725730.14692682928906858No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3422360.13496321619809723No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)