FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007914472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007914472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496926534
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCTCGTATG33955460.6833094567656957TruSeq Adapter, Index 7 (97% over 34bp)
CTCCACGCAAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT26097350.5251752163429454No Hit
CTCCACGCAAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15866340.3192894505407916No Hit
CTCCACGCAAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5219330.10503222595072777No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)