FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007914487

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007914487
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences335341246
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATAAAACCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT8996000.26826404766206424No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4911410.14646006295330577No Hit
GGTATAAAACCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA4709740.14044618895463876No Hit

[OK]Adapter Content

Adapter graph