FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007914496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007914496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences507603411
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACCCAGCCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT25900380.5102483442531477No Hit
ATACCCAGCCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA16888400.33270856014795375No Hit
ATACCCAGCCAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC7707130.1518336920710724No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACAGCGATAGATCTCGTATG5968460.11758116416597524TruSeq Adapter, Index 1 (97% over 35bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)