FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007914499

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007914499
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences510725484
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACCCAGCCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT22702460.44451394557785573No Hit
ATACCCAGCCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17497770.3426061660945041No Hit
ATACCCAGCCAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC6739240.13195425353006274No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGGATAGGGTGTAGATCTC5288620.10355112806550298Illumina Single End PCR Primer 1 (96% over 33bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)