FastQCFastQC Report
Tue 7 May 2024
EGAF00007914688

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007914688
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64585
Total Bases8.7 Mbp
Sequences flagged as poor quality0
Sequence length27-142
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTCCACAGCCCCAGTGTCCCTCACCTTCGGGGTGCATCGCTGGTAACA740.11457768831772083No Hit
GACCTGGCAGCCAGGAACGTACTGGTGAAAACACCGCAGCATGTCAAGAT730.11302934117829216No Hit
GCATTCATGCGTCTTCACCTGGAAGGGGTCCATGTGCCCCTCCTTCTGGC710.10993264689943484No Hit
GTCGCTTGGTGCACCGCGACCTGGCAGCCAGGAACGTACTGGTGAAAACA680.10528760548114888No Hit
GGTGCGTTCGGCACGGTGTATAAGGTAAGGTCCCTGGCACAGGCCTCTGG660.10219091120229155No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)