FastQCFastQC Report
Tue 7 May 2024
EGAF00007914689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007914689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63849
Total Bases8.6 Mbp
Sequences flagged as poor quality0
Sequence length28-142
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACGCACCGGAGCCCAGCACTTTGATCTTTTTGAATTCAGTTTCCTTCA930.14565615749659352No Hit
GAAGGGCATGAGCTGCGTGATGAGCTGCACGGTGGAGGTGAGGCAGATGC670.1049350812072233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)