FastQCFastQC Report
Tue 7 May 2024
EGAF00007914698

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007914698
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences169228
Total Bases22.9 Mbp
Sequences flagged as poor quality0
Sequence length23-142
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTATCAAGGAATTAAGAGAAGCAACATCTCCGAAAGCCAACAAGGAAAT1850.10931997069042948No Hit
GACCTGGCAGCCAGGAACGTACTGGTGAAAACACCGCAGCATGTCAAGAT1840.10872905192994067No Hit
GGTGCGTTCGGCACGGTGTATAAGGTAAGGTCCCTGGCACAGGCCTCTGG1710.10104710804358617No Hit

[OK]Adapter Content

Adapter graph