FastQCFastQC Report
Sun 23 Apr 2023
EGAF00007916509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007916509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences179391493
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACACACACACACACACACACACAC19786871.1029993490271024No Hit
CACACACACACACACACACACACACA9378660.5228040551510433No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGT7484480.41721487874567165No Hit
CTCACACACACACACACACACACACA3877490.21614681583591033No Hit
AAGCAGTGGTATCAACGCAGAGTACA3630240.20236411098936558Clontech SMARTer II A Oligonucleotide (100% over 25bp)
CCTACACACACACACACACACACACA3618250.20169574038831373No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)