FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007916979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007916979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences387356989
Sequences flagged as poor quality0
Sequence length74
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAGAAGTGCCCCCACCTGCTCCTCAGTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGACCCTTTTTCC3987190.10293321440496843No Hit
CACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAGAGGGAGAAGTGCCCCC3962420.1022937525983299No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)