FastQCFastQC Report
Sat 18 Mar 2023
EGAF00007917061

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007917061
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125184441
Sequences flagged as poor quality0
Sequence length1-98
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1767370.14118128306376349No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG1576830.12596054169383558No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)