FastQCFastQC Report
Thu 29 Jun 2023
EGAF00007917123

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007917123
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37615161
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2047790.5444054858624692No Hit
CAGAGACGGAACCAGAGACGGGCCAGAGCATCCCCCTCCTCCACCATGAA509880.13555172607130406No Hit
CGGAACCAGAGACGGGCCAGAGCATCCCCCTCCTCCACCATGAAACTCGC393920.10472373094455185No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)