FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007917463

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007917463
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23835991
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAAATACGGGTCCTATTTCAAAGATTTTTAGGGGAATTAATTCTAGGAC252780.10604971280615101No Hit
GTTAATTGTCAGTTCAGTGTTTTAATCTGACGCAGGCTTATGCGGAGGAG248830.10439255493929327No Hit
GTTTTATATTGATAATTGTTGTGATGAAATTGATGGCCCCTAAGATAGAG242360.10167817230674403No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)