FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007917505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007917505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3613
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.16606698034874065No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC60.16606698034874065No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG50.1383891502906172No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAAT50.1383891502906172No Hit
ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG50.1383891502906172No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA50.1383891502906172No Hit
GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGC40.11071132023249376No Hit
CCCGTAGCGCACGAGGGGGATGGGCTCGCTGGCGCCGGGCACCCAAGGGT40.11071132023249376No Hit
GTAAAACGTCGTGGCAAAACTCTCAAGGTCCACGCCGAGACTGACGTCAA40.11071132023249376No Hit
CTTTTTAACTGCAGCAACTTTAATATACGCTATTGGAGCTGGAATTACCG40.11071132023249376No Hit
GTTATCCCTAGGGTAACTTGTTCCGTTGGTCAAGTTATTGGATCAATTGA40.11071132023249376No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT40.11071132023249376No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)