FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007919359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007919359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521071333
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGCTTAATCGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT30182200.5792335538059623No Hit
CAGCTTAATCGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA25477760.4889495619211122No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC11521860.22111866975418507No Hit
CAGCTTAATCGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC6799190.13048482173936826No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)