FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007919362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007919362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481976023
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTAAGAATCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT29067050.6030808300187994No Hit
TGTAAGAATCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA20789990.4313490507389825No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTAAGTATCTCGTATG16037390.3327424858227854TruSeq Adapter, Index 15 (97% over 40bp)
TGTAAGAATCAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5955330.12356071081984094No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)