FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007919384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007919384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481315754
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTGATTAGCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT17439080.3623209889780587No Hit
AGTGATTAGCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA12839330.26675482556509045No Hit
AGTGATTAGCAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC5429060.11279622482500333No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)