FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007919398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007919398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences425774903
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGCTTGTCAATCTCGTATG41441880.9733283880285447TruSeq Adapter, Index 8 (97% over 37bp)
GTTGACGAATAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT19206330.45109117199423093No Hit
GTTGACGAATATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA10299780.24190669594257416No Hit
GTTGACGAATAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5870920.13788788297839152No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)