FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007919905

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007919905
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59126048
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC1992720.3370291212428066No Hit
CCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGAC669950.11330877382503225No Hit
AGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCAAGGC613650.10378674387302193No Hit
GAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCAAGG604640.10226288082031121No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)