FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007919925

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007919925
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49639979
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC1691390.3407314092538194No Hit
CCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGAC608310.12254437093939946No Hit
GAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCAAGG588750.11860399860362551No Hit
AGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCAAGGC580590.1169601622917689No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)