FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007920071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007920071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45795621
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA613390.13394075385504656No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG601350.13131168152518338No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG570080.12448351775817168No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)