FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007920232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007920232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51137937
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG867250.16959033760004827No Hit
GGCATGTCGTCCACGTGCGCCACGGCGTTGGTCAGCGCGTCGGCCACCTT553520.10824058076492214No Hit
GCGGGAAGTAGGTCTTGGTGGTGGGGAAGGACAGGAACATCCTCTCCAGG512860.10028953651376278No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)