FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007920240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007920240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40869583
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG854550.20909193029936224No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG652610.1596811007344998No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA548270.1341511118427609No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)