FastQCFastQC Report
Wed 31 May 2023
EGAF00007923492

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923492
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504050
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGAAGTGATTGACGTTGAAACCACTGAAG19430.3854776311873822No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10130.2009721257811725No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7160.1420493998611249No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6820.13530403729788712No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6660.13212974903283403No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5600.11110008927685745No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5140.10197401051482988No Hit
ACCCAGAACCCAGTGGAAAACTACATCGACT5070.10058525939886916No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5050.10018847336573752No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)