FastQCFastQC Report
Sun 21 May 2023
EGAF00007923536

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923536
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451673
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG63241.4001279686853099No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT39170.867220312039905No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8930.19770940481277383No Hit
GTGAGCGATGCCGTCGCTAACGGCCTGAAGG5920.1310682728434066No Hit
ATGTCCAACATGGACATCGATGGTATTAACA5230.11579173428564471No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)