FastQCFastQC Report
Sun 21 May 2023
EGAF00007923548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences576570
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG53000.9192292349584612No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG14140.24524342230778567No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12060.20916801082262343No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC11600.2011897948210972No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8610.14933139081117644No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7560.13112024559030128No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7270.12609050071977385No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6590.1142966161957785No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6380.11065438715160344No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6380.11065438715160344No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6070.10527776332448792No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)