FastQCFastQC Report
Sun 21 May 2023
EGAF00007923586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences431551
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20590.4771162620408712No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC16570.38396388839326057No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC13280.3077272442886241No Hit
CAGAACCTGACCCTGCGTATCCAGGTTTCTATG9350.2166603715435719No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT7920.18352407942514326No Hit
CGCCTGGACGCAGAACAGCGCGCCCAGCAGAAC7320.1696207400747536No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAGAA6720.155717400724364No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG6570.15224156588676657No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC5720.1325451684737146No Hit
GAAATGGAGAACATCCTGCAGAACCTGACTCTG5590.12953277828113016No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCGCG4690.10867776925554569No Hit
CAGGCAAGCGGTCCGGGTAACTCCTCCACCTCT4610.10682399067549374No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACAAC4500.10427504512792231No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA4340.1005674879678184No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)