FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007923618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences516179
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23540.4560433493032456No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT11380.22046615612026063No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT8680.16815872013390704No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5520.10693964690543396No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC5480.10616472192785835No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT5430.10519606570588884No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)