FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007923628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501480
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG27250.5433915609795007No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19640.39164074339953736No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG13330.26581319294887135No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC12740.25404801786711334No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG12010.2394911063252772No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8030.16012602696019781No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC7420.14796203238414293No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5080.10130015155140784No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)