FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007923632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511046
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20520.40152941222512256No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18610.3641550858435444No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG13230.25888080525040796No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC12900.2524234609017584No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG12240.2395087722044591No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8170.15986819190444695No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC7170.14030048175702384No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5480.10723105160787876No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)