FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007923636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450973
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG26870.5958228097912736No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13310.2951396203320376No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13110.290704765030279No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9360.20755122812230442No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8640.19158574903597334No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7290.1616504757491025No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6910.15322425067576106No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6620.14679371048821105No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5480.12151503526818677No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)