FastQCFastQC Report
Wed 31 May 2023
EGAF00007923640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences453838
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG27760.6116720063106218No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15150.3338195567581384No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12480.2749879913096744No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9720.21417333938541946No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT9570.21086819525910128No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7510.16547754925766464No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6740.14851114274256452No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6690.1474094280337918No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5440.11986656031447344No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4720.10400186850814608No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)