FastQCFastQC Report
Wed 31 May 2023
EGAF00007923648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences397842
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT26650.6698639158258807No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20600.5177934959104369No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC14840.37301240190829527No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13620.3423469618592306No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11990.30137592310515227No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10620.2669401420664485No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG10190.2561318312294831No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAG9440.23728012628128756No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC9360.23526927775348006No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6760.16991670059973557No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6680.16790585207192807No Hit
CGCCGTCCGCCACCTGGTCGTCGCCCGTTCT5550.1395026166166468No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5400.1357322756270077No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4560.11461836608502873No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT4500.1131102296891731No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT4450.1118534493592934No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG4160.10456412344599113No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4130.1038100552480633No Hit
GCGGAGCAGCACACGCCGATGAAGGCGCACG4010.10079378245635201No Hit
AACGTAACCACCAACCAGGACGGCACCGTCT3980.1000397142584242No Hit

[OK]Adapter Content

Adapter graph