FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007923656

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923656
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences424152
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42801.0090722193930477No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT32210.7593975744544409No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC21630.5099586940530753No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG18620.43899356834342407No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT13950.32889152945170597No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA12030.28362473830136364No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG11590.27325109866274355No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11570.2727795695882608No Hit
CGTCCATGGGCGGCATTCCGTGGTAGCTGGG10190.24024406344895227No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9930.23411418548067672No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9500.223976310379298No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9320.2197325487089534No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG9190.21666760972481564No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9150.2157245515758502No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC8040.18955468794205851No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG8010.18884739433033443No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC7470.17611610931930063No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC7400.17446575755861107No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7040.16597823421792188No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC6930.16338482430826684No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC6820.1607914143986118No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6340.14947471661102624No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG6230.1468813067013712No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC5750.13556460891378563No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT5570.13132084724344104No Hit
GCAGAAGCGCAGTCCACTCCGGAGCGTCCTG5340.1258982628868896No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC5270.12424791112620004No Hit
TCCGCTGCTTCCACCGCCGCGGATCGTCGTG4420.10420792546068391No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4380.10326486731171844No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)