FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007923664

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923664
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463153
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23180.5004825619179839No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12570.27140059548356593No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7070.1526493404987121No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6020.12997864636523998No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5920.12781953263824264No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5210.11248982517656153No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)