FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007923670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447543
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48741.0890573643203No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12440.27796211760657635No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6650.14858907412248654No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6560.14657809417195666No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5790.1293730434840898No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5370.11998847038161696No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)