FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007923686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448190
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG37740.8420535933421094No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19350.43173654030656644No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11020.24587786429862338No Hit
GTGGAACCGGCGCGTATCACTCTGACGTACA9870.22021910350520985No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7140.1593074365782369No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7080.15796871862379794No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6410.14301970146589615No Hit
TCCTCCAACAGCCCGCACGTGGTTAAAACCG6310.14078850487516456No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT5790.12918628260336018No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5140.11468350476360471No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG5040.1124523081728731No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)