FastQCFastQC Report
Wed 31 May 2023
EGAF00007923694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501234
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG34030.6789244145449032No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22950.45786997689701814No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9250.18454454406524695No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8570.17097802623126127No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7190.14344597533287845No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6330.12628832042519061No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5320.10613805128941772No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5220.104142975137361No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5020.10015282283324756No Hit

[OK]Adapter Content

Adapter graph