FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007923696

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007923696
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458868
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67921.4801642302361464No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT21750.4739925207249144No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7920.17259865582258951No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7740.16867595909934882No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6530.14230672001534211No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5580.12160359842046078No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4650.10133633201705067No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4610.10046462163410827No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4600.10024669403837269No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)